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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947827.1_cds_XP_016489351.1_79881
CDS Infomation

[gene=LOC107809264] [db_xref=GeneID:107809264] [protein=shaggy-related protein kinase eta] [protein_id=XP_016489351.1] [location=join(15475..15489,16420..16512,16774..16833,16913..17185,17289..17363,17445..17501,17926..18066,18179..18229,18305..18400,19234..19317,19564..19665,19842..19943)] [gbkey=CDS]
Sequence

ATGGCTGATGATAAGGAGATGTCTGCTCCTGTTATGGATGGGAATGATGCAGTCACTGGT
CATATAATTTCCACAACCATTGGGGGCAAGAATGGCGAGCCAAAGCAGACAGTCAGTTAC
ATGGCTGAACGTGTTGTGGGGACTGGATCATTTGGAATTGTCTTTCAGGCAAAATGTCTG
GAAAATGGGGAGACTGTGGCTATAAAGAAGGTTCTGCAAGACCGTAGATACAAGAATCGT
GAGCTGCAGCTTATGCGCACTTTGGATCACCCAAATGTTGTTTGCCTAAAGCATTGCTTC
TATTCAACTACAAGCAAAGATGAGCTTTTTCTCAATTTAGTCATGGAATATGTTCCAGAA
ACTATGTATAGAGTGCTAAAGCATTATAGCAATATGAACCAGAGAATGCCACTCATCTAT
GTTAAGCTTTACACATATCAAGTATTTAGAGGGCTCGCTTACATGCATACTGTTGCTGGT
GTATGCCATAGGGACTTGAAGCCTCAGAATGTTTTGGTAGACCCTCTTACTCACCAAGTA
AAGATCTGTGATTTTGGAAGCGCAAAAGTGCTGGTGAAAGGAGAGGCCAACATCTCATAC
ATCTGCTCGCGGTTTTATCGGGCTCCTGAACTCATATTTGGTGCAACAGAGTATACTACT
TCAATTGATATCTGGTCAGCTGGCTGTGTCCTTGCTGAGCTTCTTCTGGGCCAGCCATTA
TTCCCCGGAGAAAATGCTGTGGACCAGCTTGTTGAGATAATCAAGGTGCTTGGAACACCG
ACAAGGGAGGAAATTCGCTGTATGAATCCGAACTATACTGATTTCAGGTTTCCACAAATC
AAAGCACACCCTTGGCATAAGGTTTTCCACAAACGGATGCCTCCTGAAGCAATTGACCTT
GCTTCTCGACTCCTGCAGTACTCACCAAGTCTACGTTGCACTGCACTTGAAGCATGTGCT
CATCCTTTCTTTGATGAGCTTCGTGAACCAAATGCACGCCTTCCCAATGGTCGCCCATTG
CCGCCTCTGTTCAATTTTAAGCAGGAGTTGTCTGGTGCCTCTCCAGACCTCGTAAACAGG
TTGATACCAGACCATATAAAAAGGCAGATGGGCATGCATCTTTTTGCATCCCACGGTGAC
ATGACGTGA

Peptide Sequence

PEP ID

XP_016489351.1
PEP Infomation

PREDICTED: shaggy-related protein kinase eta [Nicotiana tabacum]
Sequence

MADDKEMSAPVMDGNDAVTGHIISTTIGGKNGEPKQTVSYMAERVVGTGSFGIVFQAKCL
ENGETVAIKKVLQDRRYKNRELQLMRTLDHPNVVCLKHCFYSTTSKDELFLNLVMEYVPE
TMYRVLKHYSNMNQRMPLIYVKLYTYQVFRGLAYMHTVAGVCHRDLKPQNVLVDPLTHQV
KICDFGSAKVLVKGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPL
FPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDL
ASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPDLVNR
LIPDHIKRQMGMHLFASHGDMT

Transcript Sequence

Gene sequence data has not been registered.